PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021293321.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | CO-like | ||||||||
Protein Properties | Length: 428aa MW: 46850.1 Da PI: 5.8946 | ||||||||
Description | CO-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 17.5 | 8.5e-06 | 2 | 34 | 3 | 35 |
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHk 35 e+ C+ ++ ++ ++C+++ lC +C H+ XP_021293321.1 2 EPLCDFCGGVRAVIYCKSDAARLCLSCDGCVHS 34 689******99****************999885 PP | |||||||
2 | zf-B_box | 16.1 | 2.4e-05 | 46 | 74 | 4 | 32 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClle 32 C++++++++ C d + lC+ C + XP_021293321.1 46 LLCEKCNSQPAVVRCLDEKLSLCQACDWN 74 57************************865 PP | |||||||
3 | CCT | 61.9 | 2e-21 | 372 | 415 | 1 | 44 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 R++a++RY+eK+ktR F K+irY+sRKa+A++R+RvKGrFvk+ XP_021293321.1 372 RDKAKMRYNEKKKTRIFGKQIRYASRKARADTRKRVKGRFVKAG 415 899**************************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 428 aa Download sequence |
MEPLCDFCGG VRAVIYCKSD AARLCLSCDG CVHSANLLSR RHARSLLCEK CNSQPAVVRC 60 LDEKLSLCQA CDWNSNSCSS FRHRREALNC YTGCPSLAEF RRIWSSVLDA SSSSAFDAGL 120 PVGSLPANDN CIINCLNQRE PGGAFGLDGT KLNEPDPCPK LEPWMGPSSL IPTNANYMPY 180 CRNQEPLFSE ESNISKGCSD LKDFKLLDGD DLCEGINMND VQLNFETADE IFGCSQGQNR 240 SQFDNVGTEG LLMEKNITLT ESDVPIEKSL EASSLGQKGC MAFPCSQVGG SESLMAAMTG 300 TSNCMLMNRG CNRNINLGYP ARQIPSTIAL SLSNIAGENG AADFQDCGLS PVFLTGESPW 360 ESNMEASCPL ARDKAKMRYN EKKKTRIFGK QIRYASRKAR ADTRKRVKGR FVKAGEAYDY 420 DPLVARNF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21880.1 | 1e-102 | CO-like family protein |