PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021293275.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB | ||||||||
Protein Properties | Length: 210aa MW: 24180.2 Da PI: 8.4921 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.4 | 2.2e-15 | 11 | 58 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd++l d+++ +G g+W++I++ ++R++k+c++rw++yl XP_021293275.1 11 KGLWTEEEDKILSDYIRVHGRGHWNRISKVTALKRCGKSCRLRWLTYL 58 678*****************************9*************97 PP | |||||||
2 | Myb_DNA-binding | 58.5 | 1.5e-18 | 65 | 109 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g +++eEd+l+++++++lG++ W++Ia +++ gRt++q+k++w+++l XP_021293275.1 65 GQFSEEEDDLIIRLHNLLGNR-WSLIAGRVP-GRTDNQVKNHWNTHL 109 579******************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 210 aa Download sequence |
MKGLENEHYR KGLWTEEEDK ILSDYIRVHG RGHWNRISKV TALKRCGKSC RLRWLTYLSP 60 DIKLGQFSEE EDDLIIRLHN LLGNRWSLIA GRVPGRTDNQ VKNHWNTHLC KKLGIKKPRG 120 KAERSTRKVS SPTDETKTVS ADNFNFEPLQ SSRITMSVDC PMNTSETSNH DAETHQFNDD 180 QHCVQSLLSA GDSFKMNSPG FLEFLDGLFY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14750.1 | 3e-65 | MYB family protein |