PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021293225.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB | ||||||||
Protein Properties | Length: 301aa MW: 33296.3 Da PI: 6.3663 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.7 | 1.1e-17 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WT+ Ed++l++++k +G g W++I++ g++R++k+c++rw++yl XP_021293225.1 15 RGTWTATEDKILIEYIKAHGEGKWRSIPKAAGLKRCGKSCRLRWLNYL 62 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52 | 1.6e-16 | 68 | 112 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ T +E++l+++++k+lG++ W++Ia +++ gRt++++k++w+++ XP_021293225.1 68 RGNITRDEEDLIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNHWNSV 112 7899******************.*********.***********987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 301 aa Download sequence |
MGRKPCCSKE EGLNRGTWTA TEDKILIEYI KAHGEGKWRS IPKAAGLKRC GKSCRLRWLN 60 YLRPDIKRGN ITRDEEDLII RLHKLLGNRW SLIAGRLPGR TDNEIKNHWN SVLSKRAQVK 120 EFDPTTKDEK KQRFISCSRK APTSSGVIQG NAGRCTKVSF SPQQKVIGED DSNTIVHTAP 180 SMDVELVHET AVASGSSDGS FTLLSSKEEN PSISRFAMDF GIGESSISET LASDFSQLSD 240 FDFCDTNTVI YEYGTKDNGQ ALLSPEGMVG NWSGNDCVDA NWDSDLGYLA AFLESTGDLT 300 I |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G22640.1 | 3e-61 | MYB family protein |