PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021292747.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 356aa    MW: 39233.3 Da    PI: 6.5098
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021292747.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.21.4e-13144191455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h   Er RR+++++ f++L  llP++     +K +K++i+ +Av+YIk+Lq
  XP_021292747.1 144 MHIWTERERRKKMRNMFANLHALLPQL----PPKADKSTIVDEAVNYIKNLQ 191
                     56678*********************6....39******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    
MIVFWALPSL PFPSLPFSKH NPPLPLFHLF YLPSLPPFKH LLSSLLLNSL SLSSFCYTQM  60
SEEGGHDSFW LWDSQSWALS NSDNNSAGSE EKSGKNLQEQ ETLRDEAKKN KRGRGGGSVG  120
ENGKGSGEVS EGKGGGGGES DHEMHIWTER ERRKKMRNMF ANLHALLPQL PPKADKSTIV  180
DEAVNYIKNL QQTLQKLQKQ KLERLQGAIN FGCEPSMMTT QKQALDSREA FLADHVSSSD  240
LANISATNFS SSLSVSQFPV LFQTWTSSNV VLNICGNEAQ ISVCSAKKPG LFTAICYILE  300
KHKIEVMSAH ISSDSDQSMF MIQAQAGGAS SQTLEAFQAE EMFKQAAGEI MCWVSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.12e-44bHLH family protein