PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021292445.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB | ||||||||
Protein Properties | Length: 344aa MW: 39198.7 Da PI: 7.2963 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.6 | 2.5e-17 | 54 | 101 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd ll ++++++G g+W++ a++ g++Rt+k+c++rw++yl XP_021292445.1 54 RGPWTLEEDSLLNHYIARHGEGRWNSLAKRAGLRRTGKSCRLRWLNYL 101 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 49.3 | 1.1e-15 | 107 | 150 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T++E+ l++ ++ ++G++ W++Ia++++ gRt++++k++w++ XP_021292445.1 107 RGNLTPQEQFLILSLHSKWGNR-WSKIAQHLP-GRTDNEIKNYWRT 150 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 344 aa Download sequence |
MHWGPFFDQE FKLGASYCLC RLVPLSIHKS DRGMSSLRKS STSSSEDDAE QLRRGPWTLE 60 EDSLLNHYIA RHGEGRWNSL AKRAGLRRTG KSCRLRWLNY LKPDVKRGNL TPQEQFLILS 120 LHSKWGNRWS KIAQHLPGRT DNEIKNYWRT RVQKQARHLK VDPNSTAFQN VIRCFWIPRL 180 LQKMEGSSSF SSMASENTTV LQSLDQASQH QALMTLQQVP GQGPGNLSEA IQNLDHQEQN 240 SDSEHCASSC VSSSESMNNI SQISQFAEYQ TSPFRIIGNN DYNNTLAKDC YYDMETINLA 300 STSAPGDFAN PVGDCHMAEN NWFSNGFADD LWSMGELWEP RNLN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68320.1 | 2e-76 | MYB family protein |