PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021292393.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | bHLH | ||||||||
Protein Properties | Length: 182aa MW: 20384.8 Da PI: 10.1948 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 37.8 | 3.3e-12 | 14 | 64 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 + +Er+RR +++ ++L +l+P+ ++k++ + +s + L +Av YIk+L+ XP_021292393.1 14 KTIERNRRIHMKALCFKLASLIPHqRFKPSEEIVSQTDQLDLAVAYIKHLR 64 689*********************999999999****************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence |
MKSSGGEASK PDRKTIERNR RIHMKALCFK LASLIPHQRF KPSEEIVSQT DQLDLAVAYI 60 KHLRERIEKL RVIKEQMMKS VEASSNIMNK NASVGLGVPV VALRDLGSSI EVMLISGLNK 120 NFMLYEVIGI LEQEGAEVVS ASFSTVGGKI FHTLHAQVKI SRVGVDTSRV CQRLQELVSY 180 YR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 2e-27 | bHLH family protein |