PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021292366.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NAC
Protein Properties Length: 324aa    MW: 36382.9 Da    PI: 8.4263
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021292366.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM178.91.3e-5551311129
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtdeel+++yL +kv++ +++  ++i +vd++k+ePwdLp+k++ +ekewyfFs rd+ky+tg r+nrat++gyWk+tgkdke+++ 
  XP_021292366.1   5 LPPGFRFHPTDEELITYYLSHKVSDISFTS-KAIVDVDLNKCEPWDLPAKASMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKTTGKDKEIFR- 97 
                     79*************************999.88***************999999****************************************. PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrle 129
                      g lvg+kktLvfykgrapkgek++Wvmheyrle
  XP_021292366.1  98 AGILVGMKKTLVFYKGRAPKGEKSNWVMHEYRLE 131
                     999*****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MEENLPPGFR FHPTDEELIT YYLSHKVSDI SFTSKAIVDV DLNKCEPWDL PAKASMGEKE  60
WYFFSLRDRK YPTGLRTNRA TEAGYWKTTG KDKEIFRAGI LVGMKKTLVF YKGRAPKGEK  120
SNWVMHEYRL ENKHPFRTTK EEWVVCRVFQ KSAAVKKPQP TSSSQPSLGS PCDANSIVNE  180
FGDVELPNLN INANPSSTGF SNIATPSYNN STANHGHLNM NLNVDFAAAN LPSSLTWPSS  240
ILSPNLSMNS FLFKALQLRN YQPRDVTTMD YSLLSSASQG IPQFGSGLSP NFQAATASSS  300
KVLDPTPQQQ QQQQEQPFNM DSMW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18400.11e-124NAC family protein