PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021292289.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB | ||||||||
Protein Properties | Length: 297aa MW: 31966.7 Da PI: 7.6083 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 36.1 | 1.5e-11 | 5 | 54 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg.....tWktIartmgkgRtlkqcksrwqky 47 g W+ eE++ + +a++++ ++ +W++Ia++++ ++l+++k ++q + XP_021292289.1 5 GTWSREEEKAFENAIAMHWTEegseeQWEKIASMVP-SKSLEELKQHYQLL 54 89**********************************.***********965 PP | |||||||
2 | Myb_DNA-binding | 38.9 | 1.9e-12 | 135 | 179 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + ++G+g+W++I+r + Rt+ q+ s+ qky XP_021292289.1 135 PWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKY 179 7*****************************99************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 297 aa Download sequence |
MAGTGTWSRE EEKAFENAIA MHWTEEGSEE QWEKIASMVP SKSLEELKQH YQLLVEDVGA 60 IEAGQVPLPS YTGEEATSSA AKDFHGFSGA AAAAAPDKRS SSGYGNGFSG LSHDSCGHGG 120 KGSSRSDQER RKGIPWTEEE HRLFLLGLDK FGKGDWRSIS RNFVISRTPT QVASHAQKYF 180 IRLNSMNRDR RRSSIHDITS VNNGDTSHQA PITGQQANAN SPAAAAAMGP SVKHRAQPHM 240 PGLGMYGAPI GRPVAAPGHM ASAVGTPVML PPGHHHHPPP PYMVPVAYPM APPPMHQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49010.1 | 9e-78 | MYB family protein |