PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021292283.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

TALE

Protein Properties

Length: 319aa MW: 35466.9 Da PI: 4.8538

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021292283.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.3	6e-09	263	297	21	55
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 k +yp+++++ LA+ +gL+++q+ +WF N+R ++ XP_021292283.1 263 KWPYPTEADKVGLAEATGLDQKQINNWFINQRKRH 297 579*****************************885 PP
2	ELK	36.3	1.2e-12	217	238	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK+ LlrKYsgy+++Lk+EFs XP_021292283.1 217 ELKEKLLRKYSGYISTLKHEFS 238 9********************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 319 aa Download sequence
MEELYGFHSS ATTAVYSMDT QPAADNMLSP PGNCPAGFPS HAAAAAAFAE HMFGSGQLLS 60 GSSGISDADS MGAEIQRGGC EEEVSSAIRA KIASHPLYPK LLQAYIDCQK VGAPPEIAKM 120 LDEISGESDV CKRTALVPTC LGADPELDHF METYCELLLK YKSDLSKPFD DATTFLNNIK 180 TQLSHLCNDE AAGSSEDDFS GGEMEAVEDY QINEDRELKE KLLRKYSGYI STLKHEFSKK 240 KKKGKLPKEA RQILLDWWNV HYKWPYPTEA DKVGLAEATG LDQKQINNWF INQRKRHWKP 300 SENMQIAVMD SLYGPFFNE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	1e-107	TALE family protein