PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021292058.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB | ||||||||
Protein Properties | Length: 223aa MW: 25304.5 Da PI: 9.4451 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.1 | 7.3e-17 | 13 | 60 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT eEd +l d+v+ +G+g W++I++ g++R++k+c++rw +yl XP_021292058.1 13 KGLWTVEEDRILMDYVRVHGKGKWNRIPKITGLKRCGKSCRLRWINYL 60 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 56.6 | 5.8e-18 | 66 | 111 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +++eE +l+++++++lG++ W++Ia +++ gRt++q+k++w+++l XP_021292058.1 66 RGDFSEEENDLIIRLHNLLGNR-WSLIAGRVP-GRTDNQVKNHWNTHL 111 899*******************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
MRDMEEKSSD YKKGLWTVEE DRILMDYVRV HGKGKWNRIP KITGLKRCGK SCRLRWINYL 60 SPGVKRGDFS EEENDLIIRL HNLLGNRWSL IAGRVPGRTD NQVKNHWNTH LSKKLGIKKG 120 KNKVNASSRI SIGKSRQDFS TSSSQNSKLS HSCDGGGHVN PKVITASEGD SQNAVDCEGA 180 QGLIAITDDY ESSTWFFHNE LRSHTPNLME FLDESLDFVW LGL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14750.1 | 2e-64 | MYB family protein |