PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021291955.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | bHLH | ||||||||
Protein Properties | Length: 268aa MW: 29281.8 Da PI: 8.0709 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 33.3 | 8.8e-11 | 157 | 204 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++YI+sLq XP_021291955.1 157 SHSLAERARREKISERMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 204 8*************************9....677*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 268 aa Download sequence |
MDPPLINESS FSAANPSSYS LAEIWPFPIN PTAGRLGVRM GNLGGFGESS GHRDGSMEES 60 TVTEQSVGCG GRRKRKDLSS EDESXXXXST TSANELNDSN GKRMKSSWTK NENADSKTEV 120 EASSAAGSKP EQSSKPAEPP KQDYIHVRAR RGQATDSHSL AERARREKIS ERMKILQDLV 180 PGCNKVIGKA LVLDEIINYI QSLQRQVEFL SMKLEAVNSR MNMSPSIEGF HSKDAPSKKI 240 LEVTAPCKPK LSLESDPSFS TNKSVMIS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 72 | 77 | RRKRKD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62610.1 | 1e-72 | bHLH family protein |