PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021291953.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB | ||||||||
Protein Properties | Length: 386aa MW: 42708.4 Da PI: 6.1884 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 57.1 | 4e-18 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd +++ +v ++G+g+W++++++ g++R++k+c++rw +yl XP_021291953.1 14 KGLWTEEEDAKILAYVSKHGTGNWTAVPKKAGLRRCGKSCRLRWTNYL 61 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 45.3 | 2.1e-14 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r ++T+ E+el++++++ G++ W+ Ia+ ++ gRt++++k++w++ XP_021291953.1 67 RESFTPREEELIIRLHAAIGSR-WSIIAQQLP-GRTDNDVKNYWNT 110 678*******************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 386 aa Download sequence |
MVRPPCCDKL NVKKGLWTEE EDAKILAYVS KHGTGNWTAV PKKAGLRRCG KSCRLRWTNY 60 LRPDLKRESF TPREEELIIR LHAAIGSRWS IIAQQLPGRT DNDVKNYWNT KLRKKLSEMG 120 IDPVTHKPFS QILADYGNIG GLPKSRTRVG SLNRDMKNAF LFKAEPYPSP APAAAAEGLM 180 TTIASSGMEP IQDNFFPNNS INHHADSDSS LDLLSQLQAI KALVTEASNY TGHQTISPDQ 240 FPNEYSLSSS PSSSTCSTCS TAAQXKSALA FSWRDFLLED AFLPPDHPQG QEDHVLELSS 300 RDFAGHQTPN VVPQSHSNNE ISAEHIVDTN NINNNHNGVK GMDSGVPSYG FHASSSTDDS 360 SFIAAMLDQE NEMFSEFANL LEDPCY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G28470.1 | 1e-75 | MYB family protein |