PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021291907.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | ARR-B | ||||||||
Protein Properties | Length: 681aa MW: 74343.4 Da PI: 6.0876 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 91.3 | 8.2e-29 | 213 | 266 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W+ eLH++Fv av+qL G++kA+Pk+ilelm+v+gLt+e+v+SHLQkYRl XP_021291907.1 213 KPRVVWSVELHQQFVAAVNQL-GIDKAVPKKILELMNVPGLTRENVASHLQKYRL 266 79*******************.********************************8 PP | |||||||
2 | Myb_DNA-binding | 42.6 | 1.4e-13 | 215 | 265 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ e+++++v av+qlG + +k+I + m+ g+t++++ s++qky+ XP_021291907.1 215 RVVWSVELHQQFVAAVNQLGIDkaVPKKILELMNvPGLTRENVASHLQKYR 265 678***********************************************7 PP | |||||||
3 | Response_reg | 75 | 2.9e-25 | 35 | 143 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+p+ +++l+++l+ y ev+ + +e al +l+e++ +D+++ D+ mp+mdG++ll++i e +lp+i+++a + + + + + G XP_021291907.1 35 VLVVDDDPTCLMILEKMLRTCLY-EVTKCNRAETALSMLRENKngFDIVISDVHMPDMDGFKLLEHIGLEM-DLPVIMMSADDGKHVVMKGVTHG 127 89*********************.***************999999**********************6654.8********************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ +e+l + XP_021291907.1 128 ACDYLIKPVRIEALKN 143 ************9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 681 aa Download sequence |
MNSSGGKGSM STASSSAAWK AGDVVPDQFP AGLRVLVVDD DPTCLMILEK MLRTCLYEVT 60 KCNRAETALS MLRENKNGFD IVISDVHMPD MDGFKLLEHI GLEMDLPVIM MSADDGKHVV 120 MKGVTHGACD YLIKPVRIEA LKNIWQHVVR KRKNEWKDFE QSGSVEEGDR QPKQSEEADY 180 SSSANEGNWK SSKKRKDDDD EAEERDDTST LKKPRVVWSV ELHQQFVAAV NQLGIDKAVP 240 KKILELMNVP GLTRENVASH LQKYRLYLRR LSGVSQHQSN LNNSFISPQE ATFGPLSPLN 300 GLDLQTLAAT GQLPAQSLAT LQAAGLGRST AKSGIAMPLV DQRNIFSFEN PKLRFGEGQQ 360 QHMNNNKQIN LLHGIPTTME PKQLASLHHS AQSIGNMNVQ VTSHGVQGSQ NNSLLIQMAQ 420 PQPRGQILND SAGSHAPRLP STMGQPILSN GIAANVSTRN GIPENIRGPG YNPVSQTSSM 480 LNFPMNHTSE LPGNSFPLGS TPGISSLTSK GAFQEDLNSD IKGSGGFMPS YDIFNDLNQH 540 KPQNWELQNV GMTFDASQHS NSLQGNLDLA QSVLVQQGFS SGQMNGQNRS AAVVSKAMFS 600 AGDCTEQGNA QNVNHHLNNL LVDNTIRIKS ERVADAGPAN LFPDHFGQDD LMSALLKQQE 660 GIAPAENEFD FDGYSMDNIP V |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16857.2 | 0.0 | ARR-B family protein |