PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021291886.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | FAR1 | ||||||||
Protein Properties | Length: 229aa MW: 26398.8 Da PI: 5.9337 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 89.2 | 5.7e-28 | 66 | 153 | 2 | 89 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 fY+eYA++vGF +r+ +s+ks+ +g+i++r++ C+keg++ +++k+ + + r+r+++r gC a++ vk+ek g+w+++k+++eH+H+l XP_021291886.1 66 FYDEYARRVGFLTRIISSRKSELDGSIIHRRLACNKEGFNLNRQKNGRVQIRKRESKREGCMARMIVKREKPGRWVISKFVKEHTHPL 153 9*********************************************99999***********************************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MDHKIVIRES CIESESDVCE ADTNKEETFL ITESCTGDES GLCELNLNQE PYEGMLFESV 60 QAAKAFYDEY ARRVGFLTRI ISSRKSELDG SIIHRRLACN KEGFNLNRQK NGRVQIRKRE 120 SKREGCMARM IVKREKPGRW VISKFVKEHT HPLLITSVNG QPNPDDKDKK IQELSSELDN 180 ANQELMACRE QLCAFMNYIE EHTEHLSKTV EGAVQNIREL ECRDNSCHL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43280.1 | 2e-54 | FAR1 family protein |