PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021291811.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

NAC

Protein Properties

Length: 281aa MW: 32766.7 Da PI: 6.0509

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021291811.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	88	1.7e-27	2	128	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 +p+Gf+F Ptdeel+ + L +kv+g+ + +++i e +iyk+eP+dL+ ++ + +++e y+++kr++ + + + +g Wkat + k++ XP_021291811.1 2 VPMGFKFCPTDEELI-QILIEKVSGNVTAPFDFIVERNIYKLEPQDLQwiQSPALKDNERYYYCKRESDS------REVSGRGWWKATSHVKTIS 89 599**********.7789999999987789***********85333344899***98753......347789********9 PP NAM 94 skkgelvglkktLvfy....kgrapkge.ktdWvmheyrl 128 + +g++ g k+ L+f+ ++r++kg ktdW+mhey l XP_021291811.1 90 A-NGRVEGYKRPLTFHrfgdNERKRKGAiKTDWIMHEYGL 128 9.999*******7776345554434*******76 PP

Sequence ? help Back to Top
Protein Sequence Length: 281 aa Download sequence
MVPMGFKFCP TDEELIQILI EKVSGNVTAP FDFIVERNIY KLEPQDLQWI QSPALKDNER 60 YYYCKRESDS REVSGRGWWK ATSHVKTISA NGRVEGYKRP LTFHRFGDNE RKRKGAIKTD 120 WIMHEYGLHS IPTDWRLCKI KYKGKERLEE DTENIRNRSC PISLEATGGC ISSINPMQVD 180 QFAFKEQQLQ PHPLLSPLTL INNDYENYFG SNSNSNMRFE TSIGEQEQQQ EMEPISSFDP 240 SWMPLMATPS HVASQQHNQS AETREAHSPF PDLWSSWENW H

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	111	141	RKRKGAIKTDWIMHEYGLHSIPTDWRLCKIK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39820.1	1e-20	NAC family protein