PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021291753.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 238aa MW: 27492.4 Da PI: 5.7384 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 63.6 | 2.9e-20 | 38 | 92 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++++f++eq++ Le +Fe+++ p + +++LA++lgL+ rq+ +WFqNrRa+ k XP_021291753.1 38 KNKRRFSDEQIRSLEFMFESDSRPESQIKQQLANELGLQPRQIAIWFQNRRARSK 92 56789************************************************99 PP | |||||||
2 | HD-ZIP_I/II | 113 | 1.9e-36 | 39 | 130 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +krr+s+eq+++LE +Fe++++ e++ K++la+eLglqprq+a+WFqnrRAR k+kq+E++y+ Lk++ydal+++ e+L++e+++Lr +l++ XP_021291753.1 39 NKRRFSDEQIRSLEFMFESDSRPESQIKQQLANELGLQPRQIAIWFQNRRARSKSKQIERNYNILKESYDALASSYESLKRENQSLRIQLQK 130 79*************************************************************************************99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MLARKEQPQA AATVKVEVGL SGLDLHVHPI TNIKPRGKNK RRFSDEQIRS LEFMFESDSR 60 PESQIKQQLA NELGLQPRQI AIWFQNRRAR SKSKQIERNY NILKESYDAL ASSYESLKRE 120 NQSLRIQLQK LKSQLEMEHG NKTHEPNRTG NSGDGNSENK SAICDANEKI TFLFEGYDHM 180 ISSDNNSRDA ESRDEDRVAL DMMEATDGSW TSSEKWCGFE SNCFLDESSC SSNWWEYW |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 87 | 95 | RRARSKSKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46680.1 | 1e-41 | HD-ZIP family protein |