PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021291727.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB_related | ||||||||
Protein Properties | Length: 289aa MW: 31841 Da PI: 9.7219 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 38.8 | 2.2e-12 | 57 | 101 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+ E++++++a +++ + Wk+I + +g +t q++s+ qky XP_021291727.1 57 RESWTEPEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 101 789*****************77.*********.*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 289 aa Download sequence |
MVSKNPNPVE GFYLDPTGMA LPGLGPFTTT ATAASTASSS EDPNKKIRKP YTITKSRESW 60 TEPEHDKFLE ALQLFDRDWK KIEAFVGSKT VIQIRSHAQK YFLKVQKNGT SEHLPPPRPK 120 RKAAHPYPQK ASKNAQPHQQ VSGSFQSSAA LLDTVCVLRT DPSSMLMNPN TSAAASSWTN 180 NAQTINFSQA KKGPGLANNS CSSTESTPKT RQIGEMTDQG NHGHALRVLP DFAQVYSFIG 240 SIFDPNVSGH LQKLKKMDPI DVETVLLLMR NLSINLTSPD FEDHVAFFL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52660.1 | 1e-108 | MYB_related family protein |