PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021291403.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family bHLH
Protein Properties Length: 216aa    MW: 24691.9 Da    PI: 6.062
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021291403.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.51.3e-0965112454
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     ++  rE+ RR+r+N++f  L ++l +    +  + +K++iL  A++ + +L
  XP_021291403.1  65 TKACREKLRRERLNERFLDLSSILEPG---RPARTDKSAILDDAIRVLTQL 112
                     6789**********************8...789*************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MDSIEDWDFL DYSFIDENAS PDLLLPNYRE TELSSGNVVH QEKEFVDRDY SLKRGRSGSC  60
SRPGTKACRE KLRRERLNER FLDLSSILEP GRPARTDKSA ILDDAIRVLT QLRTEAQELK  120
ETNEKLQEEI KSLKAEKNEL REEKLVLKGN KEKIEQQLKT MTIPPAGYLP AHPAAYHPGA  180
SKMAVFPGYG LVPMWQYLPQ SARDTSHDHE LRPPAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14410.29e-76bHLH family protein