PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021291302.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB | ||||||||
Protein Properties | Length: 279aa MW: 32770.9 Da PI: 9.7679 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59.8 | 5.9e-19 | 21 | 68 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd ll+++v+ +G g+W+++ar g++R +k+c++rw +yl XP_021291302.1 21 KGPWTAEEDRLLIEYVRVHGEGRWNSVARLAGLKRNGKSCRLRWVNYL 68 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 48.6 | 1.9e-15 | 74 | 126 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT.......-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.......tWktIartmgkgRtlkqcksrwqky 47 rg T+ E+ +++++++++G++ +W+tIar ++ gRt++++k++w+++ XP_021291302.1 74 RGQITPHEESIILELHARWGNRkmettnfRWSTIARSLP-GRTDNEIKNYWRTH 126 7888***********************************.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 279 aa Download sequence |
MSWAVMAGHL GWGIIEEGWR KGPWTAEEDR LLIEYVRVHG EGRWNSVARL AGLKRNGKSC 60 RLRWVNYLRP DLKRGQITPH EESIILELHA RWGNRKMETT NFRWSTIARS LPGRTDNEIK 120 NYWRTHFKKK AKLSPDNSDK AKARLLKRQQ FQQQQLLQQQ EQQRQQQQQQ QQQQQQQQQQ 180 QLQLNQFDMK RIMSLLDENE HRAPYVPQLR QEMATAYPNT TEEQGFFYPM INGNVSGSDT 240 SNEEILWDGL WNLDDVHGNF GSACATSKAT LHNLVTPFC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24310.1 | 2e-87 | MYB family protein |