PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021291301.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

NAC

Protein Properties

Length: 392aa MW: 44408.9 Da PI: 4.5852

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021291301.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	68.9	1.4e-21	6	161	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikev..diykvePwdLp.k.kvkaeekewyfFskrdkkya..........tgkrk..nratksg 81 +G+ F+P+d el+ + ++ + g + +++ i+++ di+k+ePwdLp ++++++ wyf + k++ +gkrk nrat++g XP_021291301.1 6 KGYGFRPSDGELIGHLRNRTLLGGDYFVQD-ITDLgiDICKWEPWDLPgLsMATSSDPVWYFLYPVTYKNPktkpkmmnkvNGKRKpiNRATNEG 99 79*********88777778888876644.666556*******6435555677999998888855556665554444333888* PP NAM 82 yWkatgkdkevlsk.kgelvglkktLvfy..............kgrapkgektdWvmheyrl 128 Wk +g+ +v ++ +++++g+k+ L f+ k +++ +kt Wv+ ey+l XP_021291301.1 100 KWKPSGNPVKVRASdSNKEIGIKRHLYFFtsavnekndnkskaKTTNSYHNKTPWVLYEYEL 161 *******99867788******8888877665443323444445*******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MNNFSKGYGF RPSDGELIGH LRNRTLLGGD YFVQDITDLG IDICKWEPWD LPGLSMATSS 60 DPVWYFLYPV TYKNPKTKPK MMNKVNGKRK PINRATNEGK WKPSGNPVKV RASDSNKEIG 120 IKRHLYFFTS AVNEKNDNKS KAKTTNSYHN KTPWVLYEYE LTDVHPNLQV QLGFDQPLVE 180 MEVSNGYDWM QNQSSVSEQV PVDNYETYPE ERCDVNDYEV SNLPCTFENY VAHDAIPQNL 240 QVDYPVERSN EHNVIAGNEG LDLSYNFNNH PIADNLFDFG YSYLDGLYLD ELFGALEAPN 300 NHDGVQNQSS TNQQDADEFR NSNFINNEIA YPDGTSKAAA AEIEGSNLPS WGIPESSYPM 360 ESSRKRSCME HEGSSADIET EVAPAQAKKS RI

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MNNFSKGYGF RPSDGELIGH LRNRTLLGGD YFVQDITDLG IDICKWEPWD LPGLSMATSS  60
DPVWYFLYPV TYKNPKTKPK MMNKVNGKRK PINRATNEGK WKPSGNPVKV RASDSNKEIG  120
IKRHLYFFTS AVNEKNDNKS KAKTTNSYHN KTPWVLYEYE LTDVHPNLQV QLGFDQPLVE  180
MEVSNGYDWM QNQSSVSEQV PVDNYETYPE ERCDVNDYEV SNLPCTFENY VAHDAIPQNL  240
QVDYPVERSN EHNVIAGNEG LDLSYNFNNH PIADNLFDFG YSYLDGLYLD ELFGALEAPN  300
NHDGVQNQSS TNQQDADEFR NSNFINNEIA YPDGTSKAAA AEIEGSNLPS WGIPESSYPM  360
ESSRKRSCME HEGSSADIET EVAPAQAKKS RI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.2	1e-19	NAC family protein