PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021291300.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

NAC

Protein Properties

Length: 433aa MW: 48857.8 Da PI: 4.6272

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021291300.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	68.6	1.8e-21	6	161	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikev..diykvePwdLp.k.kvkaeekewyfFskrdkkya..........tgkrk..nratksg 81 +G+ F+P+d el+ + ++ + g + +++ i+++ di+k+ePwdLp ++++++ wyf + k++ +gkrk nrat++g XP_021291300.1 6 KGYGFRPSDGELIGHLRNRTLLGGDYFVQD-ITDLgiDICKWEPWDLPgLsMATSSDPVWYFLYPVTYKNPktkpkmmnkvNGKRKpiNRATNEG 99 79*********88777778888876644.666556*******6435555677999998888855556665554444333888* PP NAM 82 yWkatgkdkevlsk.kgelvglkktLvfy..............kgrapkgektdWvmheyrl 128 Wk +g+ +v ++ +++++g+k+ L f+ k +++ +kt Wv+ ey+l XP_021291300.1 100 KWKPSGNPVKVRASdSNKEIGIKRHLYFFtsavnekndnkskaKTTNSYHNKTPWVLYEYEL 161 *******99867788******8888877665443323444445*******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 433 aa Download sequence
MNNFSKGYGF RPSDGELIGH LRNRTLLGGD YFVQDITDLG IDICKWEPWD LPGLSMATSS 60 DPVWYFLYPV TYKNPKTKPK MMNKVNGKRK PINRATNEGK WKPSGNPVKV RASDSNKEIG 120 IKRHLYFFTS AVNEKNDNKS KAKTTNSYHN KTPWVLYEYE LTDVHPNLQN EFFLGKLMKQ 180 SEPTNISSSK GETSQQLPST CLGNHIPTSE VQLGFDQPLV EMEVSNGYDW MQNQSSVSEQ 240 VPVDNYETYP EERCDVNDYE VSNLPCTFEN YVAHDAIPQN LQVDYPVERS NEHNVIAGNE 300 GLDLSYNFNN HPIADNLFDF GYSYLDGLYL DELFGALEAP NNHDGVQNQS STNQQDADEF 360 RNSNFINNEI AYPDGTSKAA AAEIEGSNLP SWGIPESSYP MESSRKRSCM EHEGSSADIE 420 TEVAPAQAKK SRI

Sequence ? help Back to Top

Protein Sequence Length: 433 aa Download sequence

MNNFSKGYGF RPSDGELIGH LRNRTLLGGD YFVQDITDLG IDICKWEPWD LPGLSMATSS  60
DPVWYFLYPV TYKNPKTKPK MMNKVNGKRK PINRATNEGK WKPSGNPVKV RASDSNKEIG  120
IKRHLYFFTS AVNEKNDNKS KAKTTNSYHN KTPWVLYEYE LTDVHPNLQN EFFLGKLMKQ  180
SEPTNISSSK GETSQQLPST CLGNHIPTSE VQLGFDQPLV EMEVSNGYDW MQNQSSVSEQ  240
VPVDNYETYP EERCDVNDYE VSNLPCTFEN YVAHDAIPQN LQVDYPVERS NEHNVIAGNE  300
GLDLSYNFNN HPIADNLFDF GYSYLDGLYL DELFGALEAP NNHDGVQNQS STNQQDADEF  360
RNSNFINNEI AYPDGTSKAA AAEIEGSNLP SWGIPESSYP MESSRKRSCM EHEGSSADIE  420
TEVAPAQAKK SRI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24590.2	7e-21	NAC family protein