PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021291298.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | FAR1 | ||||||||
Protein Properties | Length: 186aa MW: 21982.1 Da PI: 8.453 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 61.6 | 2.4e-19 | 25 | 108 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY++YA++ GF +r+ +s+ks+ +g ++r + C + +++e + ++++++r +C a+++++++k+g+w+++k++++HnH+l+ XP_021291298.1 25 FYDNYARQRGFFTRVLSSHKSELDGLLISRGLGCRGYFDNQTEVQL-----QKQEKQRESCSAMIHLRRDKTGRWVIKKFVSDHNHPLV 108 9*********************************998888887766.....889999******************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence |
MHEYDSIQEP YVGMIFESEE AAKIFYDNYA RQRGFFTRVL SSHKSELDGL LISRGLGCRG 60 YFDNQTEVQL QKQEKQRESC SAMIHLRRDK TGRWVIKKFV SDHNHPLVLQ LEESCRRLDE 120 EKDKKIQELT AELRVKKRLS ASYREQLVAF MKEVEDHNYH ISMKVQATLD NLKKLDAKAY 180 ELLHGR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43280.1 | 9e-55 | FAR1 family protein |