PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021291233.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 436aa    MW: 48146.1 Da    PI: 6.5952
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021291233.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.93.4e-20269319256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     +++GVr+++ +g+WvAeIr p++   r+r++lg+f+taeeAa a++ a+  l+ge
  XP_021291233.1 269 QFRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFDTAEEAAMAYDTAAYMLRGE 319
                     79******9.**********955...5*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 436 aa     Download sequence    
MSMENQFPKT ETFMNKEWPS YIYGMATGPK FFNDPIMWGA LSGTACHENG XGSGSKLSSS  60
SSPSLDRLLS SSNSSSSAEE APGANLLKNN PGFIRQDVVN EXHSSLFVPG FSSVHPPGDS  120
VSDIRDGFIP VNFLESLPEV HQAQVSEPPS PSSLSTTSKF PNLTLFMPEP TMLDPSTRAI  180
DSTGKKSEPT STLSQDPTFH TPQLGQIHSQ LGNEWLRINQ SLTNYPSKGF SDYWLSTTKT  240
QPMKHTGRRL QNQHQKGSSM SSASSTGKQF RGVRQRHWGK WVAEIRLPRN RTRVWLGTFD  300
TAEEAAMAYD TAAYMLRGEY AHLNFPDLKH QLKANSLNGN TAALLEAKLQ AISQGLSANK  360
KSNDPSPTEE KVKDLNQNTA KREWQFEVES KAGSEVNESN KKSQEMPPSD VDAVQLSRMP  420
SLDMDMIWDA LLVSDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.11e-64ERF family protein