PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021291086.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family FAR1
Protein Properties Length: 277aa    MW: 31866 Da    PI: 6.514
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021291086.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR182.47.4e-2699189190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerr..traetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                     +fY +Y++++GF+vr++++++s+ n++++ ++fvCskeg+r+++  +++++    + + tr gC+a++++ +++ +kw+vtk+++ HnH+l+
  XP_021291086.1  99 EFYAAYGRRTGFTVRIHHNRRSRVNNQVIGQDFVCSKEGFRAKKYIHRKDR-VlpPPPITREGCQAMIRLALRDGAKWVVTKFVKGHNHKLM 189
                     6******************************************98883322.234899********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MSVDLGVSIF QCFLQSTVGR MMDNQSSLEF DSDESDLDVR DKNYEEHGQM EDVLHKNLDF  60
CVSEDEKLAE QSGGSLSLIT DALEPYMGME FNSRDEAREF YAAYGRRTGF TVRIHHNRRS  120
RVNNQVIGQD FVCSKEGFRA KKYIHRKDRV LPPPPITREG CQAMIRLALR DGAKWVVTKF  180
VKGHNHKLMS PNKVPLRESG KHLVGEDEKD KRIRELSLEL YNERQKCKRR CAAYEEQLNL  240
ILKDLENHTA HISKTVADMV QSIREIEEEQ SVSDGVG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07500.12e-42FAR1 family protein