PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021291024.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | GATA | ||||||||
Protein Properties | Length: 313aa MW: 33176.7 Da PI: 4.6928 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 50.7 | 2.5e-16 | 223 | 259 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg ++ Tp++Rrgp g++tLCnaCGl+++ kg+ XP_021291024.1 223 CTHCGISSksTPMMRRGPAGPRTLCNACGLKWANKGV 259 *****99999************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 313 aa Download sequence |
MANSNHQPTS MYGSGAMNMQ QNLEEEDDDV PGGTGGGGEE SVDNPQIGYQ ETTGVVTVMN 60 NGMEEASHAN IYGQGSDLTV VPGNGGADQL TLSFQGEVYV FDSVSPDKVQ AVLLLLGGYE 120 IPSGIPALGT VPVTQRGLGD FPGRAIQPQR AASLNRFREK RKERCFDKKI RYTVRKEVAL 180 RMQRKKGQFT SSKAISDEVA SASSGWSVTP GSGQDESMEE TSCTHCGISS KSTPMMRRGP 240 AGPRTLCNAC GLKWANKGVL RDLSKVSTIP IEDASAKPTE QSDAEANDSE AVTVTTDVIS 300 SSNGDNSAVS AER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51600.2 | 9e-83 | GATA family protein |