PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021290927.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family G2-like
Protein Properties Length: 306aa    MW: 33404.6 Da    PI: 7.3404
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021290927.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like97.78.5e-313994155
         G2-like  1 kprlrWtpeLHerFveaveqLGGse.kAtPktilelmkvkgLtlehvkSHLQkYRl 55
                    kprlrWt  LHerFv+av+qLGG   kAtPkti+++m+vkgLtl+h+kSHLQkYRl
  XP_021290927.1 39 KPRLRWTARLHERFVDAVTQLGGLTvKATPKTIMRTMGVKGLTLYHLKSHLQKYRL 94
                    79*********************7549****************************8 PP
2Myb_DNA-binding69.74.7e-224193148
                     TSSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg....tWktIartmg.kgRtlkqcksrwqkyl 48
                     r+rWT+ ++e++vdav+qlGg     t+ktI+rtmg kg+tl+++ks++qky+
   XP_021290927.1 41 RLRWTARLHERFVDAVTQLGGLtvkaTPKTIMRTMGvKGLTLYHLKSHLQKYR 93
                     89******************88******************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MYPAIRSLPL DGNXGDYQGS LDGXNLPGDA CLVLTTDPKP RLRWTARLHE RFVDAVTQLG  60
GLTVKATPKT IMRTMGVKGL TLYHLKSHLQ KYRLGKQSCK ESTDNSKDAS CVAESQDTGS  120
STTSTSRMVA QDLNDGYQVT EALRVQMEVQ RRLHEQLEVQ RRLQLRIEAQ GKYLQSILEK  180
ACKALNDQAA ASAGLEAARE ELSELAIKVS NDCQEMIPLD NIKLPSLSEL AAALENKTAS  240
SMPARIGDCS VESCLTSTGS PVSPMGVGSQ AAIMKKRPRP LFGNADPLPL DGNIRQEIEW  300
VMPNIS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1276280KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13640.11e-117G2-like family protein