PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021290477.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB | ||||||||
Protein Properties | Length: 319aa MW: 35912.6 Da PI: 6.5145 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 59.1 | 9.5e-19 | 22 | 69 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT eEd +l+++++ +G g+W++ ar+ g++Rt+k+c++rw++yl XP_021290477.1 22 RGPWTVEEDFKLINYIATHGEGRWNSLARCAGLKRTGKSCRLRWLNYL 69 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.3 | 2.7e-16 | 75 | 118 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++ XP_021290477.1 75 RGNITLEEQLLILELHSRWGNR-WSKIAQHLP-GRTDNEIKNYWRT 118 7999******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 319 aa Download sequence |
MDVKARGCSA DVQSEEEMDL RRGPWTVEED FKLINYIATH GEGRWNSLAR CAGLKRTGKS 60 CRLRWLNYLR PDVRRGNITL EEQLLILELH SRWGNRWSKI AQHLPGRTDN EIKNYWRTRV 120 QKHAKQLKCD VNSKQFKDTM RYLWMPRLAE RIQAAAAATA TSSTSVTTTT TTTTSASATT 180 TAPNVGTGQM VLPHGVLGND FGRAQVTPSY TPENSSTAAS SDSFGTQVSP VSDLTTDYYS 240 NIPVSNNPNP DYYFQASQAG YSDSLISPSG NYYSHGMDFQ SMEQNNTNNP WLDGGDDASD 300 NFFNPEDFYF LQQQFNFNM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06490.1 | 1e-96 | MYB family protein |