PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021290454.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB | ||||||||
Protein Properties | Length: 290aa MW: 32799.4 Da PI: 4.9746 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.9 | 1e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed++l+ +v+++G +W++ +r g+ R++k+c++rw +yl XP_021290454.1 14 KGPWTPQEDQILISYVQKYGHANWRALPRQAGLSRCGKSCRLRWINYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 54 | 3.7e-17 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T eE+e +++++++lG++ W++Ia++++ gRt++++k+ w+++l XP_021290454.1 67 RGNFTSEEEETIINLHEMLGNR-WSAIAARLP-GRTDNEIKNVWHTHL 112 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 290 aa Download sequence |
MVRAPCCDKM GMKKGPWTPQ EDQILISYVQ KYGHANWRAL PRQAGLSRCG KSCRLRWINY 60 LRPDIKRGNF TSEEEETIIN LHEMLGNRWS AIAARLPGRT DNEIKNVWHT HLKKRLKQYQ 120 TKPGTKQNTK SKPKIKCESS DNIVPIQSEF GNSSSSTGND IPARTETPGQ TPMSPQPSSS 180 EISSITNATT TTTDREVNNT DVKAENMDSW EYFPEIDESF WSDAMSSDNS SAPLTFEGVS 240 DEFQSQVPSS SVDAMETDYG YGQNLDDAME FWYDLFIKAG GEQELITEFH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 112 | 118 | LKKRLKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G23250.1 | 3e-86 | MYB family protein |