PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021290401.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

FAR1

Protein Properties

Length: 701aa MW: 78189.9 Da PI: 6.7385

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021290401.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	22.7	3.3e-07	36	112	6	88
FAR1 6 YAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 +A + G+ v+++ s k t C + g +++ k+ ++ ++r++a+ t+C +++ kk+ d++w +t + eHnHe XP_021290401.1 36 FALTQGYMVSIRDSAKD------RYVTVACDRGGVYRKRLKNgENMRQRKNASRLTNCPFEVVGKKD-DDVWTLTVKNGEHNHE 112 67777777777766665......567899***999999885666777888999**988888.*************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 701 aa Download sequence
MEVKDQNEHN LEKKMLPPTT GTFQSREELL KHVRDFALTQ GYMVSIRDSA KDRYVTVACD 60 RGGVYRKRLK NGENMRQRKN ASRLTNCPFE VVGKKDDDVW TLTVKNGEHN HEPSKDTSDH 120 PSCRRFTEEE VLIIRDMSAA GKRPRQILKA LRQRNPNLVS DSRNVYNVKA KIRRGSLSGE 180 DIQVSLEGKK AEASCSSSME TMNTNGVAAT VTQTQPMVHN SFAMSQAYVE SKEVTETKAL 240 VAELCQHFYP LGWLSGTGGS ITIRVHDGSI PRQHQLIVMS PSGVQKERMV ADGMYVLSSD 300 GFIMSTPSLK LYPYQPPKCT DCAPLFMKIT HMEMIKGIQG HGYHDELVVP IIENTAHEGE 360 LTESLTEAMR AYPKTTAILV RNHGVYIWGD SWISTKTQAE CYHYLFDAAI KLYQLGLDWS 420 SPNHGPLRSI NGLWGCSGNS SRGPKVGTFG LDYMIEPSQR CLLLTIEGTV TPMSFVTDIL 480 FPYAHDNVQK HLAMTYDSEE TQHDIDLLRS QIQEDLEQGV AGAVPIPPDY VGKELVIASL 540 AANVEAMIST DRKVTSLKQL EGHIWRAGFQ SNELVGVVFE DVPEALEKWH ASGTKVYIFA 600 NGSREVQQLL FANSNYGDLR KYLCGFFDTT VGNKQVARSY FEILQTVGVD RPADMLFVTD 660 SFQEAVAARA AGLEVIISIR PGNGPLPQNH GFRTIASLLE I

Sequence ? help Back to Top

Protein Sequence Length: 701 aa Download sequence

MEVKDQNEHN LEKKMLPPTT GTFQSREELL KHVRDFALTQ GYMVSIRDSA KDRYVTVACD  60
RGGVYRKRLK NGENMRQRKN ASRLTNCPFE VVGKKDDDVW TLTVKNGEHN HEPSKDTSDH  120
PSCRRFTEEE VLIIRDMSAA GKRPRQILKA LRQRNPNLVS DSRNVYNVKA KIRRGSLSGE  180
DIQVSLEGKK AEASCSSSME TMNTNGVAAT VTQTQPMVHN SFAMSQAYVE SKEVTETKAL  240
VAELCQHFYP LGWLSGTGGS ITIRVHDGSI PRQHQLIVMS PSGVQKERMV ADGMYVLSSD  300
GFIMSTPSLK LYPYQPPKCT DCAPLFMKIT HMEMIKGIQG HGYHDELVVP IIENTAHEGE  360
LTESLTEAMR AYPKTTAILV RNHGVYIWGD SWISTKTQAE CYHYLFDAAI KLYQLGLDWS  420
SPNHGPLRSI NGLWGCSGNS SRGPKVGTFG LDYMIEPSQR CLLLTIEGTV TPMSFVTDIL  480
FPYAHDNVQK HLAMTYDSEE TQHDIDLLRS QIQEDLEQGV AGAVPIPPDY VGKELVIASL  540
AANVEAMIST DRKVTSLKQL EGHIWRAGFQ SNELVGVVFE DVPEALEKWH ASGTKVYIFA  600
NGSREVQQLL FANSNYGDLR KYLCGFFDTT VGNKQVARSY FEILQTVGVD RPADMLFVTD  660
SFQEAVAARA AGLEVIISIR PGNGPLPQNH GFRTIASLLE I