PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021290394.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | bHLH | ||||||||
Protein Properties | Length: 329aa MW: 35111 Da PI: 8.6662 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34.3 | 4.2e-11 | 263 | 308 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri ++ +L+el+P+ +k s a++L +Av++Ik Lq XP_021290394.1 263 SIAERERRTRISGKLKKLQELVPNM----DKQTSYADMLDLAVQHIKGLQ 308 689*********************7....688*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 329 aa Download sequence |
MYPSSSSSSS QKPMGHTGLT RYGSAPGSLL TTTVDAVIGA DPNLVGHYFT ADSSSLTSES 60 TCKVSSSNDP REPKAAAAAS AAPPPHGSYS GTTSSSLLRQ RSSPAGFLSH VTTENGFSVT 120 RGSRNYSSQG GANGGHRVSR LKSQLSFTRQ DSLSQISEVS ENLVDGVSSS SNHQNAAHSF 180 AAAGFGMDSW DNTNSIVFSA PPSKRAKNID GDIYNCLNAL ETQFSLPQTT LEMATVEKLL 240 HIPEDSVPCK IRAKRGCATH PRSIAERERR TRISGKLKKL QELVPNMDKQ TSYADMLDLA 300 VQHIKGLQNE VQKLHKELET CTCGCKQGS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G05805.1 | 4e-87 | bHLH family protein |