PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021290392.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

FAR1

Protein Properties

Length: 724aa MW: 80750.9 Da PI: 6.9485

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021290392.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	22.6	3.4e-07	36	112	6	88
FAR1 6 YAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 +A + G+ v+++ s k t C + g +++ k+ ++ ++r++a+ t+C +++ kk+ d++w +t + eHnHe XP_021290392.1 36 FALTQGYMVSIRDSAKD------RYVTVACDRGGVYRKRLKNgENMRQRKNASRLTNCPFEVVGKKD-DDVWTLTVKNGEHNHE 112 67777777777766665......567899***999999885666777888999**988888.*************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 724 aa Download sequence
MEVKDQNEHN LEKKMLPPTT GTFQSREELL KHVRDFALTQ GYMVSIRDSA KDRYVTVACD 60 RGGVYRKRLK NGENMRQRKN ASRLTNCPFE VVGKKDDDVW TLTVKNGEHN HEPSKDTSDH 120 PSCRRFTEEE VLIIRDMSAA GKRPRQILKA LRQRNPNLVS DSRNVYNVKA KIRRGSLSGK 180 KAEASCSSSM ETMNTNGVAA TVTQTQPMVH NSFAMSQAYV ESKEVTETKA LVAELCQHFY 240 PLGWLSGTGG SITIRVHDGS IPRQHQLIVM SPSGVQKERM VADGMYVLSS DGFIMSTPSL 300 KLYPYQPPKC TDCAPLFMKV YEICNAGAVI HSHGLEACLV TMINPFSKEF RITHMEMIKG 360 IQGHGYHDEL VVPIIENTAH EGELTESLTE AMRAYPKTTA ILVRNHGVYI WGDSWISTKT 420 QAECYHYLFD AAIKLYQLGL DWSSPNHGPL RSINGLWGCS GNSSRGPKVG TFGLDYMIEP 480 SQRCLLLTIE GTVTPMSFVT DILFPYAHDN VQKHLAMTYD SEETQHDIDL LRSQIQEDLE 540 QGVAGAVPIP PDYVGKELVI ASLAANVEAM ISTDRKVTSL KQLEGHIWRA GFQSNELVGV 600 VFEDVPEALE KWHASGTKVY IFANGSREVQ QLLFANSNYG DLRKYLCGFF DTTVGNKQVA 660 RSYFEILQTV GVDRPADMLF VTDSFQEAVA ARAAGLEVII SIRPGNGPLP QNHGFRTIAS 720 LLEI

Sequence ? help Back to Top

Protein Sequence Length: 724 aa Download sequence

MEVKDQNEHN LEKKMLPPTT GTFQSREELL KHVRDFALTQ GYMVSIRDSA KDRYVTVACD  60
RGGVYRKRLK NGENMRQRKN ASRLTNCPFE VVGKKDDDVW TLTVKNGEHN HEPSKDTSDH  120
PSCRRFTEEE VLIIRDMSAA GKRPRQILKA LRQRNPNLVS DSRNVYNVKA KIRRGSLSGK  180
KAEASCSSSM ETMNTNGVAA TVTQTQPMVH NSFAMSQAYV ESKEVTETKA LVAELCQHFY  240
PLGWLSGTGG SITIRVHDGS IPRQHQLIVM SPSGVQKERM VADGMYVLSS DGFIMSTPSL  300
KLYPYQPPKC TDCAPLFMKV YEICNAGAVI HSHGLEACLV TMINPFSKEF RITHMEMIKG  360
IQGHGYHDEL VVPIIENTAH EGELTESLTE AMRAYPKTTA ILVRNHGVYI WGDSWISTKT  420
QAECYHYLFD AAIKLYQLGL DWSSPNHGPL RSINGLWGCS GNSSRGPKVG TFGLDYMIEP  480
SQRCLLLTIE GTVTPMSFVT DILFPYAHDN VQKHLAMTYD SEETQHDIDL LRSQIQEDLE  540
QGVAGAVPIP PDYVGKELVI ASLAANVEAM ISTDRKVTSL KQLEGHIWRA GFQSNELVGV  600
VFEDVPEALE KWHASGTKVY IFANGSREVQ QLLFANSNYG DLRKYLCGFF DTTVGNKQVA  660
RSYFEILQTV GVDRPADMLF VTDSFQEAVA ARAAGLEVII SIRPGNGPLP QNHGFRTIAS  720
LLEI