PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021290384.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

FAR1

Protein Properties

Length: 725aa MW: 80880 Da PI: 6.867

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021290384.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	22.6	3.4e-07	36	112	6	88
FAR1 6 YAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 +A + G+ v+++ s k t C + g +++ k+ ++ ++r++a+ t+C +++ kk+ d++w +t + eHnHe XP_021290384.1 36 FALTQGYMVSIRDSAKD------RYVTVACDRGGVYRKRLKNgENMRQRKNASRLTNCPFEVVGKKD-DDVWTLTVKNGEHNHE 112 67777777777766665......567899***999999885666777888999**988888.*************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 725 aa Download sequence
MEVKDQNEHN LEKKMLPPTT GTFQSREELL KHVRDFALTQ GYMVSIRDSA KDRYVTVACD 60 RGGVYRKRLK NGENMRQRKN ASRLTNCPFE VVGKKDDDVW TLTVKNGEHN HEPSKDTSDH 120 PSCRRFTEEE VLIIRDMSAA GKRPRQILKA LRQRNPNLVS DSRNVYNVKA KIRRGSLSEG 180 KKAEASCSSS METMNTNGVA ATVTQTQPMV HNSFAMSQAY VESKEVTETK ALVAELCQHF 240 YPLGWLSGTG GSITIRVHDG SIPRQHQLIV MSPSGVQKER MVADGMYVLS SDGFIMSTPS 300 LKLYPYQPPK CTDCAPLFMK VYEICNAGAV IHSHGLEACL VTMINPFSKE FRITHMEMIK 360 GIQGHGYHDE LVVPIIENTA HEGELTESLT EAMRAYPKTT AILVRNHGVY IWGDSWISTK 420 TQAECYHYLF DAAIKLYQLG LDWSSPNHGP LRSINGLWGC SGNSSRGPKV GTFGLDYMIE 480 PSQRCLLLTI EGTVTPMSFV TDILFPYAHD NVQKHLAMTY DSEETQHDID LLRSQIQEDL 540 EQGVAGAVPI PPDYVGKELV IASLAANVEA MISTDRKVTS LKQLEGHIWR AGFQSNELVG 600 VVFEDVPEAL EKWHASGTKV YIFANGSREV QQLLFANSNY GDLRKYLCGF FDTTVGNKQV 660 ARSYFEILQT VGVDRPADML FVTDSFQEAV AARAAGLEVI ISIRPGNGPL PQNHGFRTIA 720 SLLEI

Sequence ? help Back to Top

Protein Sequence Length: 725 aa Download sequence

MEVKDQNEHN LEKKMLPPTT GTFQSREELL KHVRDFALTQ GYMVSIRDSA KDRYVTVACD  60
RGGVYRKRLK NGENMRQRKN ASRLTNCPFE VVGKKDDDVW TLTVKNGEHN HEPSKDTSDH  120
PSCRRFTEEE VLIIRDMSAA GKRPRQILKA LRQRNPNLVS DSRNVYNVKA KIRRGSLSEG  180
KKAEASCSSS METMNTNGVA ATVTQTQPMV HNSFAMSQAY VESKEVTETK ALVAELCQHF  240
YPLGWLSGTG GSITIRVHDG SIPRQHQLIV MSPSGVQKER MVADGMYVLS SDGFIMSTPS  300
LKLYPYQPPK CTDCAPLFMK VYEICNAGAV IHSHGLEACL VTMINPFSKE FRITHMEMIK  360
GIQGHGYHDE LVVPIIENTA HEGELTESLT EAMRAYPKTT AILVRNHGVY IWGDSWISTK  420
TQAECYHYLF DAAIKLYQLG LDWSSPNHGP LRSINGLWGC SGNSSRGPKV GTFGLDYMIE  480
PSQRCLLLTI EGTVTPMSFV TDILFPYAHD NVQKHLAMTY DSEETQHDID LLRSQIQEDL  540
EQGVAGAVPI PPDYVGKELV IASLAANVEA MISTDRKVTS LKQLEGHIWR AGFQSNELVG  600
VVFEDVPEAL EKWHASGTKV YIFANGSREV QQLLFANSNY GDLRKYLCGF FDTTVGNKQV  660
ARSYFEILQT VGVDRPADML FVTDSFQEAV AARAAGLEVI ISIRPGNGPL PQNHGFRTIA  720
SLLEI