PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021290379.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | bHLH | ||||||||
Protein Properties | Length: 242aa MW: 27372.2 Da PI: 8.224 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 24.4 | 5.3e-08 | 94 | 138 | 7 | 55 |
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + Er RR+++ + + L++++P++ +K + +i+ +++ YI+sL+ XP_021290379.1 94 KKERDRREKMAENYVLLQSMVPNL----FPKATRETIVGETIAYIQSLE 138 57*********************8....39*****************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MSAFPSSHAK AEKKRQRERN MEDQQNWKGE AEEECEINEL LCSIMEGYND KVIPPLSQFS 60 PSRQAAAAIV EEKGSSSRER GRAKEAEEMT ESLKKERDRR EKMAENYVLL QSMVPNLFPK 120 ATRETIVGET IAYIQSLEKE ITRMEELKNS SESSKGKMHL YSNRKSSIDV TVSSNVVFFG 180 IQSMVRPRLV TDIFMVLHKH KAEVLAANVA VNHRQLTLTV TAVVSGNRDG TIEKIKGDIL 240 IL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G09820.1 | 4e-15 | bHLH family protein |