PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021290376.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

FAR1

Protein Properties

Length: 728aa MW: 81179.4 Da PI: 6.867

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021290376.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	22.6	3.5e-07	36	112	6	88
FAR1 6 YAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 +A + G+ v+++ s k t C + g +++ k+ ++ ++r++a+ t+C +++ kk+ d++w +t + eHnHe XP_021290376.1 36 FALTQGYMVSIRDSAKD------RYVTVACDRGGVYRKRLKNgENMRQRKNASRLTNCPFEVVGKKD-DDVWTLTVKNGEHNHE 112 67777777777766665......567899***999999885666777888999**988888.*************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 728 aa Download sequence
MEVKDQNEHN LEKKMLPPTT GTFQSREELL KHVRDFALTQ GYMVSIRDSA KDRYVTVACD 60 RGGVYRKRLK NGENMRQRKN ASRLTNCPFE VVGKKDDDVW TLTVKNGEHN HEPSKDTSDH 120 PSCRRFTEEE VLIIRDMSAA GKRPRQILKA LRQRNPNLVS DSRNVYNVKA KIRRGSLSVS 180 LEGKKAEASC SSSMETMNTN GVAATVTQTQ PMVHNSFAMS QAYVESKEVT ETKALVAELC 240 QHFYPLGWLS GTGGSITIRV HDGSIPRQHQ LIVMSPSGVQ KERMVADGMY VLSSDGFIMS 300 TPSLKLYPYQ PPKCTDCAPL FMKVYEICNA GAVIHSHGLE ACLVTMINPF SKEFRITHME 360 MIKGIQGHGY HDELVVPIIE NTAHEGELTE SLTEAMRAYP KTTAILVRNH GVYIWGDSWI 420 STKTQAECYH YLFDAAIKLY QLGLDWSSPN HGPLRSINGL WGCSGNSSRG PKVGTFGLDY 480 MIEPSQRCLL LTIEGTVTPM SFVTDILFPY AHDNVQKHLA MTYDSEETQH DIDLLRSQIQ 540 EDLEQGVAGA VPIPPDYVGK ELVIASLAAN VEAMISTDRK VTSLKQLEGH IWRAGFQSNE 600 LVGVVFEDVP EALEKWHASG TKVYIFANGS REVQQLLFAN SNYGDLRKYL CGFFDTTVGN 660 KQVARSYFEI LQTVGVDRPA DMLFVTDSFQ EAVAARAAGL EVIISIRPGN GPLPQNHGFR 720 TIASLLEI

Sequence ? help Back to Top

Protein Sequence Length: 728 aa Download sequence

MEVKDQNEHN LEKKMLPPTT GTFQSREELL KHVRDFALTQ GYMVSIRDSA KDRYVTVACD  60
RGGVYRKRLK NGENMRQRKN ASRLTNCPFE VVGKKDDDVW TLTVKNGEHN HEPSKDTSDH  120
PSCRRFTEEE VLIIRDMSAA GKRPRQILKA LRQRNPNLVS DSRNVYNVKA KIRRGSLSVS  180
LEGKKAEASC SSSMETMNTN GVAATVTQTQ PMVHNSFAMS QAYVESKEVT ETKALVAELC  240
QHFYPLGWLS GTGGSITIRV HDGSIPRQHQ LIVMSPSGVQ KERMVADGMY VLSSDGFIMS  300
TPSLKLYPYQ PPKCTDCAPL FMKVYEICNA GAVIHSHGLE ACLVTMINPF SKEFRITHME  360
MIKGIQGHGY HDELVVPIIE NTAHEGELTE SLTEAMRAYP KTTAILVRNH GVYIWGDSWI  420
STKTQAECYH YLFDAAIKLY QLGLDWSSPN HGPLRSINGL WGCSGNSSRG PKVGTFGLDY  480
MIEPSQRCLL LTIEGTVTPM SFVTDILFPY AHDNVQKHLA MTYDSEETQH DIDLLRSQIQ  540
EDLEQGVAGA VPIPPDYVGK ELVIASLAAN VEAMISTDRK VTSLKQLEGH IWRAGFQSNE  600
LVGVVFEDVP EALEKWHASG TKVYIFANGS REVQQLLFAN SNYGDLRKYL CGFFDTTVGN  660
KQVARSYFEI LQTVGVDRPA DMLFVTDSFQ EAVAARAAGL EVIISIRPGN GPLPQNHGFR  720
TIASLLEI