PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021290369.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

FAR1

Protein Properties

Length: 729aa MW: 81293.5 Da PI: 6.7903

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021290369.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	22.6	3.5e-07	36	112	6	88
FAR1 6 YAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 +A + G+ v+++ s k t C + g +++ k+ ++ ++r++a+ t+C +++ kk+ d++w +t + eHnHe XP_021290369.1 36 FALTQGYMVSIRDSAKD------RYVTVACDRGGVYRKRLKNgENMRQRKNASRLTNCPFEVVGKKD-DDVWTLTVKNGEHNHE 112 67777777777766665......567899***999999885666777888999**988888.*************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 729 aa Download sequence
MEVKDQNEHN LEKKMLPPTT GTFQSREELL KHVRDFALTQ GYMVSIRDSA KDRYVTVACD 60 RGGVYRKRLK NGENMRQRKN ASRLTNCPFE VVGKKDDDVW TLTVKNGEHN HEPSKDTSDH 120 PSCRRFTEEE VLIIRDMSAA GKRPRQILKA LRQRNPNLVS DSRNVYNVKA KIRRGSLSGE 180 DIQGKKAEAS CSSSMETMNT NGVAATVTQT QPMVHNSFAM SQAYVESKEV TETKALVAEL 240 CQHFYPLGWL SGTGGSITIR VHDGSIPRQH QLIVMSPSGV QKERMVADGM YVLSSDGFIM 300 STPSLKLYPY QPPKCTDCAP LFMKVYEICN AGAVIHSHGL EACLVTMINP FSKEFRITHM 360 EMIKGIQGHG YHDELVVPII ENTAHEGELT ESLTEAMRAY PKTTAILVRN HGVYIWGDSW 420 ISTKTQAECY HYLFDAAIKL YQLGLDWSSP NHGPLRSING LWGCSGNSSR GPKVGTFGLD 480 YMIEPSQRCL LLTIEGTVTP MSFVTDILFP YAHDNVQKHL AMTYDSEETQ HDIDLLRSQI 540 QEDLEQGVAG AVPIPPDYVG KELVIASLAA NVEAMISTDR KVTSLKQLEG HIWRAGFQSN 600 ELVGVVFEDV PEALEKWHAS GTKVYIFANG SREVQQLLFA NSNYGDLRKY LCGFFDTTVG 660 NKQVARSYFE ILQTVGVDRP ADMLFVTDSF QEAVAARAAG LEVIISIRPG NGPLPQNHGF 720 RTIASLLEI

Sequence ? help Back to Top

Protein Sequence Length: 729 aa Download sequence

MEVKDQNEHN LEKKMLPPTT GTFQSREELL KHVRDFALTQ GYMVSIRDSA KDRYVTVACD  60
RGGVYRKRLK NGENMRQRKN ASRLTNCPFE VVGKKDDDVW TLTVKNGEHN HEPSKDTSDH  120
PSCRRFTEEE VLIIRDMSAA GKRPRQILKA LRQRNPNLVS DSRNVYNVKA KIRRGSLSGE  180
DIQGKKAEAS CSSSMETMNT NGVAATVTQT QPMVHNSFAM SQAYVESKEV TETKALVAEL  240
CQHFYPLGWL SGTGGSITIR VHDGSIPRQH QLIVMSPSGV QKERMVADGM YVLSSDGFIM  300
STPSLKLYPY QPPKCTDCAP LFMKVYEICN AGAVIHSHGL EACLVTMINP FSKEFRITHM  360
EMIKGIQGHG YHDELVVPII ENTAHEGELT ESLTEAMRAY PKTTAILVRN HGVYIWGDSW  420
ISTKTQAECY HYLFDAAIKL YQLGLDWSSP NHGPLRSING LWGCSGNSSR GPKVGTFGLD  480
YMIEPSQRCL LLTIEGTVTP MSFVTDILFP YAHDNVQKHL AMTYDSEETQ HDIDLLRSQI  540
QEDLEQGVAG AVPIPPDYVG KELVIASLAA NVEAMISTDR KVTSLKQLEG HIWRAGFQSN  600
ELVGVVFEDV PEALEKWHAS GTKVYIFANG SREVQQLLFA NSNYGDLRKY LCGFFDTTVG  660
NKQVARSYFE ILQTVGVDRP ADMLFVTDSF QEAVAARAAG LEVIISIRPG NGPLPQNHGF  720
RTIASLLEI