PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021290361.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

FAR1

Protein Properties

Length: 730aa MW: 81422.6 Da PI: 6.7171

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021290361.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	22.6	3.5e-07	36	112	6	88
FAR1 6 YAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 +A + G+ v+++ s k t C + g +++ k+ ++ ++r++a+ t+C +++ kk+ d++w +t + eHnHe XP_021290361.1 36 FALTQGYMVSIRDSAKD------RYVTVACDRGGVYRKRLKNgENMRQRKNASRLTNCPFEVVGKKD-DDVWTLTVKNGEHNHE 112 67777777777766665......567899***999999885666777888999**988888.*************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 730 aa Download sequence
MEVKDQNEHN LEKKMLPPTT GTFQSREELL KHVRDFALTQ GYMVSIRDSA KDRYVTVACD 60 RGGVYRKRLK NGENMRQRKN ASRLTNCPFE VVGKKDDDVW TLTVKNGEHN HEPSKDTSDH 120 PSCRRFTEEE VLIIRDMSAA GKRPRQILKA LRQRNPNLVS DSRNVYNVKA KIRRGSLSGE 180 DIQEGKKAEA SCSSSMETMN TNGVAATVTQ TQPMVHNSFA MSQAYVESKE VTETKALVAE 240 LCQHFYPLGW LSGTGGSITI RVHDGSIPRQ HQLIVMSPSG VQKERMVADG MYVLSSDGFI 300 MSTPSLKLYP YQPPKCTDCA PLFMKVYEIC NAGAVIHSHG LEACLVTMIN PFSKEFRITH 360 MEMIKGIQGH GYHDELVVPI IENTAHEGEL TESLTEAMRA YPKTTAILVR NHGVYIWGDS 420 WISTKTQAEC YHYLFDAAIK LYQLGLDWSS PNHGPLRSIN GLWGCSGNSS RGPKVGTFGL 480 DYMIEPSQRC LLLTIEGTVT PMSFVTDILF PYAHDNVQKH LAMTYDSEET QHDIDLLRSQ 540 IQEDLEQGVA GAVPIPPDYV GKELVIASLA ANVEAMISTD RKVTSLKQLE GHIWRAGFQS 600 NELVGVVFED VPEALEKWHA SGTKVYIFAN GSREVQQLLF ANSNYGDLRK YLCGFFDTTV 660 GNKQVARSYF EILQTVGVDR PADMLFVTDS FQEAVAARAA GLEVIISIRP GNGPLPQNHG 720 FRTIASLLEI

Sequence ? help Back to Top

Protein Sequence Length: 730 aa Download sequence

MEVKDQNEHN LEKKMLPPTT GTFQSREELL KHVRDFALTQ GYMVSIRDSA KDRYVTVACD  60
RGGVYRKRLK NGENMRQRKN ASRLTNCPFE VVGKKDDDVW TLTVKNGEHN HEPSKDTSDH  120
PSCRRFTEEE VLIIRDMSAA GKRPRQILKA LRQRNPNLVS DSRNVYNVKA KIRRGSLSGE  180
DIQEGKKAEA SCSSSMETMN TNGVAATVTQ TQPMVHNSFA MSQAYVESKE VTETKALVAE  240
LCQHFYPLGW LSGTGGSITI RVHDGSIPRQ HQLIVMSPSG VQKERMVADG MYVLSSDGFI  300
MSTPSLKLYP YQPPKCTDCA PLFMKVYEIC NAGAVIHSHG LEACLVTMIN PFSKEFRITH  360
MEMIKGIQGH GYHDELVVPI IENTAHEGEL TESLTEAMRA YPKTTAILVR NHGVYIWGDS  420
WISTKTQAEC YHYLFDAAIK LYQLGLDWSS PNHGPLRSIN GLWGCSGNSS RGPKVGTFGL  480
DYMIEPSQRC LLLTIEGTVT PMSFVTDILF PYAHDNVQKH LAMTYDSEET QHDIDLLRSQ  540
IQEDLEQGVA GAVPIPPDYV GKELVIASLA ANVEAMISTD RKVTSLKQLE GHIWRAGFQS  600
NELVGVVFED VPEALEKWHA SGTKVYIFAN GSREVQQLLF ANSNYGDLRK YLCGFFDTTV  660
GNKQVARSYF EILQTVGVDR PADMLFVTDS FQEAVAARAA GLEVIISIRP GNGPLPQNHG  720
FRTIASLLEI