PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021290049.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | bHLH | ||||||||
Protein Properties | Length: 260aa MW: 27678.7 Da PI: 7.4665 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 11.7 | 0.00047 | 158 | 196 | 11 | 54 |
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A+ YIk L XP_021290049.1 158 ARKEKVGDRITALQQLVSPF-----GKTDTASVLHEAMGYIKFL 196 577888899********998.....8****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MMAETDQGFE GDQGTATTTS FSQLLFGGDD DVVSLDLGQS FNYTYSSFPA HQKTPKMLCF 60 GGQQTDAEIV FGEPLASTTK TATTPQRSGV TCSDSSSASS GNNSKSVKAP SKSTRKRNRG 120 RESVECTGAI VTAQPVNQRT DKKSKVENPA TSTGHAKARK EKVGDRITAL QQLVSPFGKT 180 DTASVLHEAM GYIKFLHDQV QVLCSPYLQH LPDGGENGGE DSRKDLKSRG LCLVPVACTV 240 HVANSNGADF WSPAMGNNGF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19500.1 | 8e-53 | bHLH family protein |