PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021290040.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | bHLH | ||||||||
Protein Properties | Length: 262aa MW: 27931 Da PI: 7.8397 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 11.7 | 0.00047 | 158 | 196 | 11 | 54 |
HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +A+ YIk L XP_021290040.1 158 ARKEKVGDRITALQQLVSPF-----GKTDTASVLHEAMGYIKFL 196 577888899********998.....8****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence |
MMAETDQGFE GDQGTATTTS FSQLLFGGDD DVVSLDLGQS FNYTYSSFPA HQKTPKMLCF 60 GGQQTDAEIV FGEPLASTTK TATTPQRSGV TCSDSSSASS GNNSKSVKAP SKSTRKRNRG 120 RESVECTGAI VTAQPVNQRT DKKSKVENPA TSTGHAKARK EKVGDRITAL QQLVSPFGKT 180 DTASVLHEAM GYIKFLHDQV QVLCSPYLQH LPDGGENGGE DSRKDLKSRG LCLVPVACTV 240 HVANSNGADF WSPAMGNNVT KQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G19500.1 | 8e-53 | bHLH family protein |