PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021289857.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

Dof

Protein Properties

Length: 289aa MW: 31999.4 Da PI: 5.8387

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021289857.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	116.4	1.2e-36	16	70	7	61
zf-Dof 7 kcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +cprC s+ntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvPvGgg rkn++ XP_021289857.1 16 NCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGYRKNRRG 70 8***************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 289 aa Download sequence
MVMERGWKPS VEISPNCPRC GSSNTKFCYY NNYSLTQPRY FCKGCRRYWT KGGSLRNVPV 60 GGGYRKNRRG KSLRLPTDGV PSKELSCGVL PPDSIGHSSG NKVNASAESN SSSAMSDGSQ 120 IDLALVYANF LNQHPENKSG FEVPDQLPSE FDPSLEFSSL TNTSMDSSIQ LPKENGLIVC 180 LTRSDLSTEN HLSNNDQVYY SGLESVHKHQ DRVQQCTCQE TCNFALPPLP GDDLFSQETL 240 WTNSHSSMSQ TLQATQEPVL GPEVHDPNLL FGNWSPFDLS GDDTFSRIH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52440.1	7e-53	Dof family protein