PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021289773.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | ERF | ||||||||
Protein Properties | Length: 275aa MW: 29301 Da PI: 8.432 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.2 | 4.2e-18 | 109 | 159 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ +g+Wv+eIr+p+ + r++lg+f tae+Aa a++ a+++l+g XP_021289773.1 109 PVYRGVRRRT-SGKWVSEIREPR----KpNRIWLGTFPTAEMAAIAYDVAALALKG 159 68*****888.8*********94....478***********************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 275 aa Download sequence |
MSNMYLAYTP TISRRSSSPT GLHFAVLLKL NLENLSLCNK NLTPKFPSTI NGFSRLQLQT 60 PNLRAISLYQ IQVTMHYSKS NQSSRANTSS SSGGSASGAG ASAATGRHPV YRGVRRRTSG 120 KWVSEIREPR KPNRIWLGTF PTAEMAAIAY DVAALALKGQ DAELNFPNSA ASLPVPASTS 180 PRDIQAAATS AAAALGAAND ALFGNEDNEA KNSPIGPDKP TTVDEFVDED LIFDMPNVLV 240 NMAEGMLLSP PRLDIAPAPA PADNAGDAEN LWKFP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36450.1 | 5e-39 | ERF family protein |