PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021289702.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | NAC | ||||||||
Protein Properties | Length: 255aa MW: 28754.2 Da PI: 7.0984 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 137.7 | 7.6e-43 | 4 | 138 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk...lelee....vikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWk 84 +ppGfrF Pt+eel+++yL++k+e+++ + + vi+ v+iy+++PwdLp+ ++++ ++w+fF++ ++++a+g r++r t++gyWk XP_021289702.1 4 MPPGFRFYPTEEELISFYLHHKLESERqdlN---RlmdrVIPIVNIYEFNPWDLPQlslyLCHKDPEQWFFFIPWQESEARGGRPKRLTTTGYWK 95 79***********************995552...3333379**************656764445677**************************** PP NAM 85 atgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127 atg+ v+s++++ +g+k+t+vfy+grap+g+kt+W m+ey+ XP_021289702.1 96 ATGSPGCVYSSTNRPIGVKRTMVFYNGRAPNGRKTEWKMNEYK 138 ******************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MEDMPPGFRF YPTEEELISF YLHHKLESER QDLNRLMDRV IPIVNIYEFN PWDLPQLSLY 60 LCHKDPEQWF FFIPWQESEA RGGRPKRLTT TGYWKATGSP GCVYSSTNRP IGVKRTMVFY 120 NGRAPNGRKT EWKMNEYKAI VEAAASSNGA TPTLRHEFSL CRVYKKSKCL RSFDRRPPAG 180 GAQIRDPAAD NQGQAAVGAA AACHQSPQMA ERTISSPESS SSGDHGNPSQ TGESSNSSAM 240 VVDYNDPFWD LLDGF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22380.1 | 1e-69 | NAC family protein |