PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021289672.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family ERF
Protein Properties Length: 473aa    MW: 52546.2 Da    PI: 5.2993
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021289672.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2605.4e-19235285256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr+++ +g+WvAeIr p++   r+r +lg+f+tae+Aa a+++ + kl+ge
  XP_021289672.1 235 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEDAALAYDREAFKLRGE 285
                     59******9.**********955...5**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 473 aa     Download sequence    
MAAAKHSGKS KKGVVDETEK MTTSQDWEID KGKDLDFGFE RQQWKPVFDE ASMSQRPLKK  60
IRSPERQDPV QSSVSLAHQS SSFSAPSSVS TTSLSSLTLF PPSSSSSCSS SNATLPSSRL  120
VFPFAFDASQ QPMHFPQQYG NTPTLMPIFR PPQNQQHMIS FSPQQHQHGF VYPPFFAGES  180
TLPPQQQQQQ QQLLQYWSDA LNLSPRGRMM MMSRLGQDGR QLFRPPVQPI NTTKLYRGVR  240
QRHWGKWVAE IRLPRNRTRL WLGTFDTAED AALAYDREAF KLRGENARLN FPELFLNKDK  300
DTSTAPSSTV SSPQTPRESS KPNQNQNLPQ QEQDGLNLQS AKMEMMPPPA QPQGDNPDSD  360
SGLGSSEATA SDEVQMTAEG SGAGEGVSGS QELVWGDMAE AWFNAIPAGW GPGSPVWDDL  420
DTTNNLLIPS NLPFANQNQQ DLTDSDIQKQ QDSCASSSST SCPMKSFFWK DQD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20880.12e-50ERF family protein