PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021289650.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NAC
Protein Properties Length: 303aa    MW: 34806 Da    PI: 5.7264
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021289650.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM170.74.5e-53211481128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhP+deel+v+yLk+kv++++l++ ++i e+d+yk++Pw+Lp+k+  +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk++l++
  XP_021289650.1  21 LPPGFRFHPSDEELIVHYLKNKVTSSPLPA-SIIVEIDLYKFNPWELPSKALFGEDEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKPILTS 114
                     79****************************.89***************87778999*************************************99 PP

             NAM  96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      ++e +g+kk Lvfy+gr pkg+kt+W+mheyrl
  XP_021289650.1 115 cGTESIGVKKALVFYEGRPPKGTKTEWIMHEYRL 148
                     88889***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MLGASASASY MEKTPGSEIQ LPPGFRFHPS DEELIVHYLK NKVTSSPLPA SIIVEIDLYK  60
FNPWELPSKA LFGEDEWYFF SPRDRKYPNG ARPNRAAASG YWKATGTDKP ILTSCGTESI  120
GVKKALVFYE GRPPKGTKTE WIMHEYRLRE TMIWTPKRKG SMRLDDWVLC RVRQKSSTQR  180
NRWEDRQITS HEPADGYLPK LNEEANSDTK KLQISFSPLE SLFNPSKRTS MEGDNQATSF  240
VPPSKKLIWD ETEKEEVISV SNDYSDLNFY GTDHSEGNDF SPDQWNPIIQ YQELNHLDFT  300
EAC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.12e-86NAC family protein