PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021289648.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

NAC

Protein Properties

Length: 360aa MW: 41143.9 Da PI: 5.0612

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021289648.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	170.2	6.7e-53	21	148	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhP+deel+v+yLk+kv++++l++ ++i e+d+yk++Pw+Lp+k+ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk++l++ XP_021289648.1 21 LPPGFRFHPSDEELIVHYLKNKVTSSPLPA-SIIVEIDLYKFNPWELPSKALFGEDEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKPILTS 114 79**************************.89***********87778999*********************************99 PP NAM 96 .kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++e +g+kk Lvfy+gr pkg+kt+W+mheyrl XP_021289648.1 115 cGTESIGVKKALVFYEGRPPKGTKTEWIMHEYRL 148 88889*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MLGASASASY MEKTPGSEIQ LPPGFRFHPS DEELIVHYLK NKVTSSPLPA SIIVEIDLYK 60 FNPWELPSKA LFGEDEWYFF SPRDRKYPNG ARPNRAAASG YWKATGTDKP ILTSCGTESI 120 GVKKALVFYE GRPPKGTKTE WIMHEYRLRE TMIWTPKRKG SMRLDDWVLC RVRQKSSTQR 180 NRWEDRQITS HEPADGYLPK LNEVWPSNAN NPNVEMAESY LFSDCPMLPY IFASQDLPCF 240 DTTTSSISFQ SSDRSRTSAQ EANSDTKKLQ ISFSPLESLF NPSKRTSMEG DNQATSFVPP 300 SKKLIWDETE KEEVISVSND YSDLNFYGTD HSEGNDFSPD QWNPIIQYQE LNHLDFTEAC

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MLGASASASY MEKTPGSEIQ LPPGFRFHPS DEELIVHYLK NKVTSSPLPA SIIVEIDLYK  60
FNPWELPSKA LFGEDEWYFF SPRDRKYPNG ARPNRAAASG YWKATGTDKP ILTSCGTESI  120
GVKKALVFYE GRPPKGTKTE WIMHEYRLRE TMIWTPKRKG SMRLDDWVLC RVRQKSSTQR  180
NRWEDRQITS HEPADGYLPK LNEVWPSNAN NPNVEMAESY LFSDCPMLPY IFASQDLPCF  240
DTTTSSISFQ SSDRSRTSAQ EANSDTKKLQ ISFSPLESLF NPSKRTSMEG DNQATSFVPP  300
SKKLIWDETE KEEVISVSND YSDLNFYGTD HSEGNDFSPD QWNPIIQYQE LNHLDFTEAC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61110.1	9e-86	NAC family protein