PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021289461.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

Dof

Protein Properties

Length: 348aa MW: 36080 Da PI: 9.225

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021289461.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.3	4.1e-39	73	132	3	62
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 e+alkcprC+stntkfCy+nnysl+qPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+s+ XP_021289461.1 73 EAALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSK 132 7789*****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MVFTSIPAYL DPANWQQHPN HQAGASSGAS AHQLPPPPPP PPPPQPHGGG GAGSIRPGSM 60 ADRARMANIP MPEAALKCPR CESTNTKFCY FNNYSLTQPR HFCKTCRRYW TRGGALRNVP 120 VGGGCRRNKR SKAGSSSKSP VSGDRQTASG SSSIISSNSG STADILGLGP QLPPLRFMAP 180 LHHLSEFGGS DIGLNYGTIS APLGGASDLT FQIGSALASG GAGGGGGAAA APGTSFLTMS 240 GLDQWRLQQQ APQFPFLGGL ESSSGLYQFE SGGVEPSGYG GGAGHQVRPK ISSSSATQLA 300 SVKMEDNNQQ ELNLSRQFLG VPGNDQYWSG TAWTDLSSFS SSSTSNPL

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MVFTSIPAYL DPANWQQHPN HQAGASSGAS AHQLPPPPPP PPPPQPHGGG GAGSIRPGSM  60
ADRARMANIP MPEAALKCPR CESTNTKFCY FNNYSLTQPR HFCKTCRRYW TRGGALRNVP  120
VGGGCRRNKR SKAGSSSKSP VSGDRQTASG SSSIISSNSG STADILGLGP QLPPLRFMAP  180
LHHLSEFGGS DIGLNYGTIS APLGGASDLT FQIGSALASG GAGGGGGAAA APGTSFLTMS  240
GLDQWRLQQQ APQFPFLGGL ESSSGLYQFE SGGVEPSGYG GGAGHQVRPK ISSSSATQLA  300
SVKMEDNNQQ ELNLSRQFLG VPGNDQYWSG TAWTDLSSFS SSSTSNPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G37590.1	3e-50	Dof family protein