PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021289367.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | MYB | ||||||||
Protein Properties | Length: 357aa MW: 41203.1 Da PI: 9.9714 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.4 | 2.4e-16 | 4 | 53 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrwqkyl 48 r+rW +eEd ll +vkq+G++ W++++++m+ ++R +k+c +rw++yl XP_021289367.1 4 RQRWRAEEDALLRAYVKQYGPREWNLVSQRMNtpLNRDAKSCLERWNNYL 53 89***********************************************7 PP | |||||||
2 | Myb_DNA-binding | 34.9 | 3.5e-11 | 59 | 103 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+ T++E+ l +++ +++G++ Wk+Ia++++ gRt+k + +w + XP_021289367.1 59 KGSLTEDEQRLVIRLQAKHGNK-WKKIAAEVP-GRTAKRLGKWWEVF 103 6788******************.*********.*****999999766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 357 aa Download sequence |
MKERQRWRAE EDALLRAYVK QYGPREWNLV SQRMNTPLNR DAKSCLERWN NYLKPGIKKG 60 SLTEDEQRLV IRLQAKHGNK WKKIAAEVPG RTAKRLGKWW EVFKEKQQRE QKEKNKTVDP 120 IEEGKYDRIL ETFAEKLVKE RHSSAFSMAT SNGGFLHTDP PSPAPTLLPP WLSNSSTAPA 180 VRPPSPSVTL TLSPSTVTAA PPIPWLQPER MSENTPVVLG NMVPHGSIPP CGENPLVSEL 240 VECCRELEEG QRAWVAHKKE AAWRLRRVEL QLESEKACRR REKMEEIESK VKALREEQKA 300 TLDRIEAEYR EQLEGLRRDA EAKEQKLAEQ WAAKHLRLSK FLEQMGCRPR LTEPNGR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37630.1 | 1e-146 | MYB family protein |