PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021289342.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

bZIP

Protein Properties

Length: 591aa MW: 65744.6 Da PI: 8.1294

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021289342.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	20.5	1.1e-06	243	300	1	58
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevak 58 eke +r rr NRe+Ar +R++a +e+L+ kv+ L+ eN+ Lk e ke+++ XP_021289342.1 243 EKEARRLRRILANRESARQTIRRRQALCEKLTLKVADLTRENENLKRAKELALKEYKS 300 799******************************************9544444455555 PP

Sequence ? help Back to Top
Protein Sequence Length: 591 aa Download sequence
MDLERGLASS SSASTPGEAA EGAEEVTADR MEMEAAEILA ALAHSKKRDA VAVAVEFSAK 60 WGCKGKRVSR RVSSSESPPS EIGLNPVDPV QSSSDLAEDR AAVDQQQSQV TSTPVIIDSI 120 EAEQDSELLN GTHPCAARYT SKCVVKSRQN AEKETLRLHR MFTNKESDWQ MIRERQILFS 180 IMGMPEKDVW EDGQHDQMTG NDLLIKSVKA ERNAESVKSS PTCATKYTSG GGGRSRQNLT 240 EAEKEARRLR RILANRESAR QTIRRRQALC EKLTLKVADL TRENENLKRA KELALKEYKS 300 QESTNKHLKA QMVKAIKAEE GQAPRELKLA HQTSGPSRNY PFYFYNQHPF SPFCWPSIVQ 360 SSNPVQTQCG HQIPIVVPSS VSAPTNGRLD SSHDQENPIN NNGPKSPLYV VPYPWFFSLP 420 DHGNELHPQP SFGPKNNKDE TSANNRLCSL KSVVHEEKYN FSLPTEVEKE AYGSIEASSN 480 NQNCTSVRLP SDGSGQCIRY QIKEEVILPT PLCSAGATFV VEQDKMPDVN TEAARVRACH 540 FVGALQEENQ ESTNYTSKKV LDAAAAAEAR KRRKELTKLK NLHGRQCRTH R

Sequence ? help Back to Top

Protein Sequence Length: 591 aa Download sequence

MDLERGLASS SSASTPGEAA EGAEEVTADR MEMEAAEILA ALAHSKKRDA VAVAVEFSAK  60
WGCKGKRVSR RVSSSESPPS EIGLNPVDPV QSSSDLAEDR AAVDQQQSQV TSTPVIIDSI  120
EAEQDSELLN GTHPCAARYT SKCVVKSRQN AEKETLRLHR MFTNKESDWQ MIRERQILFS  180
IMGMPEKDVW EDGQHDQMTG NDLLIKSVKA ERNAESVKSS PTCATKYTSG GGGRSRQNLT  240
EAEKEARRLR RILANRESAR QTIRRRQALC EKLTLKVADL TRENENLKRA KELALKEYKS  300
QESTNKHLKA QMVKAIKAEE GQAPRELKLA HQTSGPSRNY PFYFYNQHPF SPFCWPSIVQ  360
SSNPVQTQCG HQIPIVVPSS VSAPTNGRLD SSHDQENPIN NNGPKSPLYV VPYPWFFSLP  420
DHGNELHPQP SFGPKNNKDE TSANNRLCSL KSVVHEEKYN FSLPTEVEKE AYGSIEASSN  480
NQNCTSVRLP SDGSGQCIRY QIKEEVILPT PLCSAGATFV VEQDKMPDVN TEAARVRACH  540
FVGALQEENQ ESTNYTSKKV LDAAAAAEAR KRRKELTKLK NLHGRQCRTH R

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	570	575	RKRRKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19490.1	2e-55	bZIP family protein