PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021289339.1

Organism

Herrania umbratica

Taxonomic ID

108875

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania

Family

bZIP

Protein Properties

Length: 603aa MW: 67170.3 Da PI: 7.9704

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021289339.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	23.2	1.5e-07	244	290	1	47
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 eke +r rr NRe+Ar +R++a +e+L+ kv+ L+ eN+ Lk XP_021289339.1 244 EKEARRLRRILANRESARQTIRRRQALCEKLTLKVADLTRENENLKR 290 799***************************************99984 PP

Sequence ? help Back to Top
Protein Sequence Length: 603 aa Download sequence
MDLERGLASS SSASTPGEAA EGAEEVTADR MEMEAAEILA ALAHSKKRDA VAVAVEFSAK 60 WGCKGKRVSR RVSSSESPPS EIGLNPVDPV QSSSDLAEQD RAAVDQQQSQ VTSTPVIIDS 120 IEAEQDSELL NGTHPCAARY TSKCVVKSRQ NAEKETLRLH RMFTNKESDW QMIRERQILF 180 SIMGMPEKDV WEDGQHDQMT GNDLLIKSVK AERNAESVKS SPTCATKYTS GGGGRSRQNL 240 TEAEKEARRL RRILANRESA RQTIRRRQAL CEKLTLKVAD LTRENENLKR LIHFDCIPTE 300 KAKELALKEY KSQESTNKHL KAQMVKAIKA EEGQAPRELK LAHQTSGPSR NYPFYFYNQH 360 PFSPFCWPSI VQSSNPVQTQ CGHQIPIVVP SSVSAPTNGR LDSSHDQENP INNNGPKSPL 420 YVVPYPWFFS LPDHGNELHP QPSFGPKNNK DETSANNRLC SLKSVVHEEK YNFSLPTEVE 480 KEAYGSIEAS SNNQNCTSVR LPSDGSGQCI RYQIKEEVIL PTPLCSAGAT FVVEQDKMPD 540 VNTEAARVRA CHFVGALQEE NQESTNYTSK KVLDAAAAAE ARKRRKELTK LKNLHGRQCR 600 THR

Sequence ? help Back to Top

Protein Sequence Length: 603 aa Download sequence

MDLERGLASS SSASTPGEAA EGAEEVTADR MEMEAAEILA ALAHSKKRDA VAVAVEFSAK  60
WGCKGKRVSR RVSSSESPPS EIGLNPVDPV QSSSDLAEQD RAAVDQQQSQ VTSTPVIIDS  120
IEAEQDSELL NGTHPCAARY TSKCVVKSRQ NAEKETLRLH RMFTNKESDW QMIRERQILF  180
SIMGMPEKDV WEDGQHDQMT GNDLLIKSVK AERNAESVKS SPTCATKYTS GGGGRSRQNL  240
TEAEKEARRL RRILANRESA RQTIRRRQAL CEKLTLKVAD LTRENENLKR LIHFDCIPTE  300
KAKELALKEY KSQESTNKHL KAQMVKAIKA EEGQAPRELK LAHQTSGPSR NYPFYFYNQH  360
PFSPFCWPSI VQSSNPVQTQ CGHQIPIVVP SSVSAPTNGR LDSSHDQENP INNNGPKSPL  420
YVVPYPWFFS LPDHGNELHP QPSFGPKNNK DETSANNRLC SLKSVVHEEK YNFSLPTEVE  480
KEAYGSIEAS SNNQNCTSVR LPSDGSGQCI RYQIKEEVIL PTPLCSAGAT FVVEQDKMPD  540
VNTEAARVRA CHFVGALQEE NQESTNYTSK KVLDAAAAAE ARKRRKELTK LKNLHGRQCR  600
THR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	582	587	RKRRKE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19490.1	5e-48	bZIP family protein