PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021289165.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
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Family | Trihelix | ||||||||
Protein Properties | Length: 481aa MW: 52805.3 Da PI: 6.895 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 57.8 | 2.8e-18 | 103 | 189 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm..rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W++ + +L+ea+ e+ ++l+rg+l++ +We+v++++ r ++ ++s +qCk+k +nl+kryk ++++++++ ++s++p+f+++e XP_021289165.1 103 EWSDAAIGCLLEAYMEKLTQLNRGNLRGRDWEDVAAAVseRCEKQSKSVEQCKNKVDNLKKRYKLERHRMSDG-GVTVSHWPWFKKME 189 5*************************************777778899*************************9.55667********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 481 aa Download sequence |
MASSVDDDFS LLDDHQTNPN HHHVLHHHHH PSYAPIHAPP PDNHDADDDS DSAFRGANFD 60 NNNNNVTSSD VPIEKRRDQE EINDGVLKRP KQSTTEYRKD REEWSDAAIG CLLEAYMEKL 120 TQLNRGNLRG RDWEDVAAAV SERCEKQSKS VEQCKNKVDN LKKRYKLERH RMSDGGVTVS 180 HWPWFKKMEE IVGNSLPVKA APDEDKAGAS PGTAVRQSKR YASATPSSAG QIISMKSKSP 240 KWRRVVFKIS GAALACTGPH NIDPKVAMLI AREVAIACRL GVEVAIVVGG RNFFCGDTWV 300 SATGLDRSTA YQIGMMASVM NSILLQSSLE KMGVQTRVQT AFSVQEVAEP YSRQRAIRHL 360 EKGRVVIFGG IGAGTGNPLF STDTAAALRA SEIHAEAVLK GTNVDGVYDC HSQDNNATFE 420 HISFRELVSR GATAMDMMAL TFCEENGIPV VVFNLLQPGN ISKALCGDQV GTLIDQTGRI 480 S |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10030.1 | 0.0 | Trihelix family protein |