PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021289134.1
Organism
Herrania umbratica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Herrania
Family NAC
Protein Properties Length: 288aa    MW: 32967 Da    PI: 8.3
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021289134.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1423.4e-44321661127
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87 
                     +ppGfrF Pt+eelv++yL++k+egk+    + + +v++ vdiy+++PwdLp+     ++++ ++w+fF++ ++++a+g r++r t+sgyWkatg
  XP_021289134.1  32 MPPGFRFYPTEEELVSFYLHNKLEGKRedlnHLMVRVVPVVDIYEYNPWDLPHfsvyLCHKDPEQWFFFIPMQESEARGGRPKRLTTSGYWKATG 126
                     79*************************55542233479999***********546653445667******************************* PP

             NAM  88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                     +   v+s++++ +g+k+t+vfy+grap+g+kt+W m+ey+
  XP_021289134.1 127 SPGYVYSSNSRPIGVKRTMVFYNGRAPSGKKTEWKMNEYK 166
                     ***************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MAINSLPPQP FNTYEQTYLI KEKERVVKME DMPPGFRFYP TEEELVSFYL HNKLEGKRED  60
LNHLMVRVVP VVDIYEYNPW DLPHFSVYLC HKDPEQWFFF IPMQESEARG GRPKRLTTSG  120
YWKATGSPGY VYSSNSRPIG VKRTMVFYNG RAPSGKKTEW KMNEYKAIEG EASSPNAAPP  180
TLRQEFSLCR VYKKSKCLRS FDRRPPPGVK IGEAVPQHGN GFGVGKSHHQ STEIADRTTI  240
ASSPESSSSG DNHHANRSNQ TRESNSSRMV VDDVCSFWDL DGFWDPVN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.13e-71NAC family protein